STRINGSTRING
MLOC_4818.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_4818.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_4818.1Predicted protein (438 aa)    
Predicted Functional Partners:
MLOC_59223.3
Predicted protein (558 aa)
     
  0.989
MLOC_10411.2
Uncharacterized protein (740 aa)
     
  0.911
MLOC_24631.1
Uncharacterized protein (91 aa)
     
  0.879
MLOC_9960.3
Predicted protein (419 aa)
     
  0.819
MLOC_38227.1
Predicted protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (399 aa)
     
  0.765
MLOC_58976.1
Ribosome biogenesis protein BOP1 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (696 aa)
     
 
  0.694
MLOC_70449.1
Predicted protein ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (595 aa)
     
 
  0.674
MLOC_4699.1
Predicted protein (448 aa)
     
 
  0.614
MLOC_55357.1
Predicted protein (563 aa)
     
 
  0.583
MLOC_49400.1
Predicted protein (164 aa)
     
 
  0.583
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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