STRINGSTRING
rps18 protein (Hordeum vulgare) - STRING interaction network
"rps18" - 30S ribosomal protein S18, chloroplastic in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps1830S ribosomal protein S18, chloroplastic (170 aa)    
Predicted Functional Partners:
MLOC_5379.1
Predicted protein (151 aa)
   
  0.998
MLOC_68577.1
Predicted protein (303 aa)
   
  0.998
MLOC_68939.1
Predicted protein (264 aa)
     
  0.989
MLOC_60101.1
Uncharacterized protein (440 aa)
     
  0.989
MLOC_9478.1
Uncharacterized protein (97 aa)
     
  0.988
MLOC_81866.1
Predicted protein (128 aa)
   
  0.987
MLOC_75821.1
Uncharacterized protein (148 aa)
   
  0.987
MLOC_72785.3
Predicted protein (67 aa)
     
  0.987
MLOC_39690.1
Predicted protein (139 aa)
     
  0.987
MLOC_54323.1
Predicted protein (127 aa)
     
  0.985
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
Server load: low (12%) [HD]