STRINGSTRING
MLOC_51592.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_51592.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_51592.1Uncharacterized protein (551 aa)    
Predicted Functional Partners:
MLOC_65294.3
Uncharacterized protein (380 aa)
 
          0.950
MLOC_55106.10
DNA polymerase (1783 aa)
       
 
  0.793
MLOC_12731.1
Uncharacterized protein (477 aa)
     
      0.733
MLOC_73716.2
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (418 aa)
   
   
  0.624
MLOC_38365.1
Ribosomal RNA-processing protein 46 (157 aa)
           
  0.497
MLOC_19949.9
Predicted protein (655 aa)
     
      0.484
MLOC_10890.2
Predicted protein (625 aa)
     
      0.483
MLOC_63002.1
Uncharacterized protein (848 aa)
     
 
  0.468
MLOC_56305.2
Predicted protein (721 aa)
     
 
  0.468
MLOC_64602.2
DNA polymerase (792 aa)
     
 
  0.459
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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