STRINGSTRING
MLOC_51852.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_51852.1" - Predicted protein in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_51852.1Predicted protein (221 aa)    
Predicted Functional Partners:
MLOC_75102.1
Uncharacterized protein (1928 aa)
   
 
  0.563
MLOC_73169.3
Uncharacterized protein (88 aa)
   
   
  0.529
MLOC_72735.4
Uncharacterized protein (190 aa)
   
   
  0.529
MLOC_69413.1
Uncharacterized protein (645 aa)
   
   
  0.529
MLOC_61356.2
Uncharacterized protein (727 aa)
   
   
  0.529
MLOC_59496.1
Uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts [...] (412 aa)
   
   
  0.529
MLOC_58514.8
Predicted protein (912 aa)
   
   
  0.529
MLOC_21051.4
Predicted protein (415 aa)
   
   
  0.529
MLOC_19702.1
Uncharacterized protein ; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts [...] (232 aa)
   
   
  0.529
MLOC_1607.2
Predicted protein (1503 aa)
   
   
  0.529
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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