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MLOC_51915.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_51915.2" - E3 ubiquitin-protein ligase in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_51915.2E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (371 aa)    
Predicted Functional Partners:
MLOC_6055.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
    0.737
MLOC_41668.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (124 aa)
       
    0.737
MLOC_3932.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (146 aa)
       
    0.737
MLOC_15173.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (153 aa)
       
  0.711
MLOC_70672.1
Uncharacterized protein (149 aa)
       
  0.689
MLOC_70097.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
  0.689
MLOC_66347.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (148 aa)
       
  0.689
MLOC_50935.2
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (126 aa)
       
  0.689
MLOC_57406.1
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (259 aa)
     
  0.689
MLOC_60637.4
Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family (183 aa)
       
  0.688
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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