STRINGSTRING
MLOC_51936.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_51936.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_51936.1Uncharacterized protein (428 aa)    
Predicted Functional Partners:
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family (216 aa)
     
 
  0.900
rpoA
Uncharacterized protein; DNA-directed RNA polymerase subunit alpha (233 aa)
       
 
  0.856
AGP50786
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)
       
 
  0.856
MLOC_67202.2
Uncharacterized protein (228 aa)
       
 
  0.700
MLOC_62067.2
Uncharacterized protein (603 aa)
           
  0.694
MLOC_45294.1
Uncharacterized protein (232 aa)
 
       
  0.627
MLOC_75882.1
Uncharacterized protein (166 aa)
           
  0.546
MLOC_23254.2
Uncharacterized protein; Belongs to the carbohydrate kinase PfkB family (462 aa)
           
  0.545
MLOC_18827.1
Uncharacterized protein (478 aa)
     
   
  0.508
MLOC_57729.1
Uncharacterized protein (717 aa)
       
 
  0.482
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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