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STRINGSTRING
MLOC_52174.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_52174.3" - Pectinesterase in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_52174.3Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (532 aa)    
Predicted Functional Partners:
MLOC_52717.1
Uncharacterized protein (143 aa)
     
   
  0.672
MLOC_61812.1
Uncharacterized protein (488 aa)
 
   
  0.641
MLOC_4738.2
Uncharacterized protein (532 aa)
 
   
  0.571
MLOC_67284.4
Predicted protein (532 aa)
 
   
  0.568
MLOC_53562.2
Uncharacterized protein (476 aa)
 
   
  0.548
MLOC_6444.1
Uncharacterized protein (409 aa)
 
   
  0.542
MLOC_22135.1
Uncharacterized protein (415 aa)
 
   
  0.542
MLOC_13972.1
Uncharacterized protein (311 aa)
 
   
  0.529
MLOC_61073.1
Uncharacterized protein (869 aa)
           
  0.505
MLOC_54501.1
Predicted protein; Belongs to the glycosyl hydrolase 28 family (434 aa)
 
   
  0.435
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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