STRINGSTRING
TOC1 protein (Hordeum vulgare) - STRING interaction network
"TOC1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOC1Predicted protein; Timing of cab expression 1; Uncharacterized protein (522 aa)    
Predicted Functional Partners:
MLOC_44010.1
Predicted protein (589 aa)
       
  0.998
MLOC_53725.1
Predicted protein; Uncharacterized protein (626 aa)
     
 
  0.994
MLOC_20007.1
Predicted protein (616 aa)
       
  0.982
MLOC_70638.4
Uncharacterized protein (428 aa)
     
  0.977
MLOC_18291.1
Uncharacterized protein (741 aa)
     
  0.977
CCA1
Circadian clock associated 1; Predicted protein; Uncharacterized protein (717 aa)
       
 
  0.940
MLOC_72393.1
Uncharacterized protein (202 aa)
       
  0.923
MLOC_23537.1
Uncharacterized protein (197 aa)
       
  0.923
MLOC_57021.1
Uncharacterized protein (604 aa)
     
 
0.914
MLOC_75281.1
Uncharacterized protein (375 aa)
     
 
  0.906
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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