STRINGSTRING
MLOC_52707.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_52707.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_52707.1Predicted protein (171 aa)    
Predicted Functional Partners:
MLOC_7170.3
Predicted protein (529 aa)
           
  0.694
MLOC_63598.1
Uncharacterized protein (336 aa)
           
  0.694
MLOC_6074.1
GID1-like gibberellin receptor (354 aa)
           
  0.694
MLOC_55588.2
Uncharacterized protein (569 aa)
     
  0.650
MLOC_10713.1
Uncharacterized protein (102 aa)
       
  0.609
MLOC_55756.1
Uncharacterized protein (222 aa)
     
 
  0.581
MLOC_4418.3
Predicted protein (297 aa)
     
 
  0.581
MLOC_59280.2
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (252 aa)
       
  0.572
MLOC_54951.1
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin- conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates (301 aa)
       
  0.572
MLOC_64183.2
Uncharacterized protein (695 aa)
     
   
  0.554
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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