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MLOC_52827.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_52827.1" - H/ACA ribonucleoprotein complex subunit in Hordeum vulgare
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_52827.1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1 (140 aa)    
Predicted Functional Partners:
MLOC_62912.1
Predicted protein (150 aa)
     
  0.999
MLOC_72585.1
Uncharacterized protein (64 aa)
     
  0.997
MLOC_77535.1
Uncharacterized protein (168 aa)
     
  0.995
MLOC_58704.1
Uncharacterized protein (286 aa)
     
  0.995
MLOC_47794.9
Uncharacterized protein (257 aa)
     
  0.995
MLOC_4782.1
Uncharacterized protein (242 aa)
     
  0.994
MLOC_75176.1
Uncharacterized protein (186 aa)
     
  0.991
MLOC_73194.1
Predicted protein (128 aa)
     
  0.991
MLOC_44617.1
Uncharacterized protein (557 aa)
   
  0.988
MLOC_13273.1
Uncharacterized protein (385 aa)
   
  0.988
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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