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STRINGSTRING
MLOC_53114.4 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53114.4" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53114.4Uncharacterized protein (272 aa)    
Predicted Functional Partners:
MLOC_67376.2
Uncharacterized protein (314 aa)
     
  0.972
MLOC_70449.2
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (595 aa)
     
  0.971
MLOC_38227.2
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (399 aa)
     
  0.963
MLOC_1517.1
Predicted protein (107 aa)
     
  0.963
MLOC_58976.1
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (696 aa)
     
  0.963
MLOC_14462.1
Uncharacterized protein (315 aa)
     
  0.960
MLOC_6378.3
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (188 aa)
     
  0.956
MLOC_58525.1
Uncharacterized protein (1074 aa)
     
  0.953
MLOC_67065.1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly (329 aa)
     
    0.950
MLOC_69162.1
Protein MAK16 homolog; Belongs to the MAK16 family (118 aa)
     
    0.949
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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