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STRINGSTRING
MLOC_5347.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_5347.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_5347.1Uncharacterized protein; Belongs to the DEAD box helicase family (372 aa)    
Predicted Functional Partners:
MLOC_65877.3
Uncharacterized protein (313 aa)
     
    0.981
MLOC_81801.1
Predicted protein (445 aa)
     
    0.980
MLOC_70474.2
Uncharacterized protein (420 aa)
     
  0.978
MLOC_44617.1
Uncharacterized protein (557 aa)
   
  0.958
MLOC_13273.1
Uncharacterized protein (385 aa)
   
  0.958
MLOC_67295.3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (291 aa)
     
  0.956
MLOC_13317.1
Uncharacterized protein (501 aa)
   
0.956
MLOC_73620.2
Uncharacterized protein (548 aa)
     
  0.956
MLOC_77296.2
Uncharacterized protein (763 aa)
     
  0.955
MLOC_60118.1
Uncharacterized protein (906 aa)
     
  0.955
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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