STRINGSTRING
MLOC_53551.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53551.1" - SNF2P in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53551.1SNF2P (614 aa)    
Predicted Functional Partners:
MLOC_51067.4
Uncharacterized protein (1054 aa)
     
  0.937
MLOC_55519.1
Predicted protein (155 aa)
     
  0.929
MLOC_61052.6
Predicted protein (823 aa)
     
  0.896
MLOC_71794.3
Predicted protein (637 aa)
     
  0.888
MLOC_26628.1
Predicted protein (384 aa)
     
  0.870
MLOC_62016.2
DNA-directed RNA polymerase subunit ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1281 aa)
     
  0.868
MLOC_38181.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (881 aa)
     
  0.866
MLOC_74152.2
Predicted protein (200 aa)
     
  0.849
MLOC_70036.1
Predicted protein (150 aa)
     
  0.849
MLOC_22034.1
Uncharacterized protein (142 aa)
     
  0.849
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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