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STRINGSTRING
MLOC_53562.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53562.2" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53562.2Uncharacterized protein (476 aa)    
Predicted Functional Partners:
MLOC_39697.2
Uncharacterized protein (222 aa)
         
  0.915
MLOC_60251.1
Pectate lyase (158 aa)
       
  0.763
MLOC_6904.2
Pectate lyase (405 aa)
       
  0.760
MLOC_67352.1
Pectate lyase (140 aa)
       
  0.752
MLOC_59629.3
Pectate lyase (163 aa)
       
  0.716
MLOC_18360.1
Pectate lyase (378 aa)
       
  0.714
MLOC_37134.2
Pectinesterase (409 aa)
 
 
  0.670
MLOC_53688.1
Pectinesterase (389 aa)
 
 
  0.669
MLOC_54544.1
Uncharacterized protein (868 aa)
         
  0.663
MLOC_67885.6
Predicted protein (400 aa)
   
   
0.652
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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