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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
MLOC_53633.3 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53633.3" - SAGA-associated factor 11 in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53633.3SAGA-associated factor 11 (173 aa)    
Predicted Functional Partners:
MLOC_38901.1
Uncharacterized protein (364 aa)
       
  0.990
MLOC_44114.2
Uncharacterized protein (328 aa)
       
  0.987
MLOC_34938.1
Transcriptional adapter (568 aa)
       
  0.987
MLOC_65849.2
Uncharacterized protein (125 aa)
     
  0.986
MLOC_64098.1
Uncharacterized protein (169 aa)
     
  0.985
MLOC_62732.1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family (3458 aa)
     
  0.971
MLOC_63666.1
Uncharacterized protein (489 aa)
     
  0.968
MLOC_58430.3
Uncharacterized protein (482 aa)
     
  0.968
MLOC_54063.1
Uncharacterized protein (547 aa)
     
  0.962
MLOC_78519.1
Predicted protein (419 aa)
       
  0.954
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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