STRINGSTRING
MLOC_5375.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_5375.2" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_5375.2Predicted protein; MIKC-type MADS-box transcription factor WM29B (271 aa)    
Predicted Functional Partners:
MLOC_14305.1
Uncharacterized protein (323 aa)
       
 
  0.727
MLOC_36301.1
DNA helicase; Belongs to the MCM family (637 aa)
       
 
  0.598
MLOC_36861.1
Uncharacterized protein (455 aa)
           
  0.552
MLOC_15267.2
Uncharacterized protein (211 aa)
           
  0.550
MLOC_69508.2
Uncharacterized protein (79 aa)
     
   
  0.547
MLOC_73849.8
Uncharacterized protein (346 aa)
           
  0.502
MLOC_38362.2
Uncharacterized protein (293 aa)
           
  0.499
MLOC_5803.1
Uncharacterized protein (408 aa)
       
 
  0.474
MLOC_12102.3
Uncharacterized protein (430 aa)
       
 
  0.474
MLOC_11792.1
Uncharacterized protein (437 aa)
       
 
  0.474
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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