STRINGSTRING
MLOC_53797.6 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53797.6" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53797.6Predicted protein (795 aa)    
Predicted Functional Partners:
MLOC_73858.1
Uncharacterized protein (1421 aa)
         
  0.511
MLOC_69639.1
Uncharacterized protein (1421 aa)
         
  0.511
MLOC_3977.2
Uncharacterized protein (1421 aa)
         
  0.511
MLOC_44138.2
Predicted protein (529 aa)
           
  0.497
MLOC_44105.1
Predicted protein (590 aa)
           
  0.497
MLOC_57123.2
Chloride channel protein (548 aa)
           
  0.483
MLOC_38181.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (881 aa)
         
  0.457
MLOC_12680.3
Predicted protein (421 aa)
   
        0.454
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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