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STRINGSTRING
MLOC_53875.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53875.1" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53875.1Predicted protein (336 aa)    
Predicted Functional Partners:
MLOC_3462.1
Isocitrate lyase ; Belongs to the isocitrate lyase/PEP mutase superfamily. Isocitrate lyase family (570 aa)
           
  0.563
MLOC_62343.1
Uncharacterized protein (329 aa)
       
    0.492
MLOC_53730.1
Uncharacterized protein (344 aa)
           
  0.435
MLOC_44413.1
Uncharacterized protein (389 aa)
           
  0.435
MLOC_65753.4
Uncharacterized protein (417 aa)
       
 
  0.412
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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