STRINGSTRING
MLOC_53895.2 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53895.2" - Predicted protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53895.2Predicted protein (180 aa)    
Predicted Functional Partners:
MLOC_18776.2
Predicted protein (522 aa)
 
          0.940
MLOC_6955.2
Uncharacterized protein (319 aa)
 
 
   
  0.663
MLOC_64084.2
Predicted protein (501 aa)
   
   
  0.604
MLOC_58108.2
Predicted protein (516 aa)
   
   
  0.604
MLOC_20770.1
Predicted protein (335 aa)
   
   
  0.604
MLOC_70902.2
Uncharacterized protein (1578 aa)
   
 
  0.593
MLOC_13604.1
Uncharacterized protein (2118 aa)
   
   
  0.593
MLOC_70866.1
Predicted protein (1515 aa)
   
   
  0.581
MLOC_81248.1
Predicted protein (245 aa)
   
 
  0.563
MLOC_63339.1
Uncharacterized protein (1260 aa)
   
 
  0.563
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum, Hordeum L., Hordeum vulgare, Hordeum vulgare L., Triticeae, barley, barleys
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