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STRINGSTRING
MLOC_53923.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_53923.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_53923.1Uncharacterized protein (592 aa)    
Predicted Functional Partners:
MLOC_46916.1
Uncharacterized protein (481 aa)
           
  0.731
MLOC_62749.1
Uncharacterized protein (321 aa)
           
  0.707
MLOC_61297.1
Uncharacterized protein (192 aa)
           
  0.706
MLOC_75010.1
Uncharacterized protein (324 aa)
   
 
  0.557
MLOC_61991.1
Predicted protein; Uncharacterized protein (369 aa)
   
 
  0.557
MLOC_16035.1
Uncharacterized protein (144 aa)
   
 
  0.557
MLOC_14093.1
Uncharacterized protein (392 aa)
           
  0.505
MLOC_52238.1
Uncharacterized protein (91 aa)
           
  0.504
MLOC_55345.6
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (957 aa)
           
  0.495
MLOC_4128.1
Uncharacterized protein (220 aa)
           
  0.493
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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