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STRINGSTRING
MLOC_54143.1 protein (Hordeum vulgare) - STRING interaction network
"MLOC_54143.1" - Uncharacterized protein in Hordeum vulgare
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MLOC_54143.1Uncharacterized protein (227 aa)    
Predicted Functional Partners:
MLOC_63119.1
Uncharacterized protein (207 aa)
     
  0.996
MLOC_2294.3
Uncharacterized protein; Belongs to the RecA family (288 aa)
     
  0.859
MLOC_66334.4
Uncharacterized protein (254 aa)
     
  0.853
MLOC_36384.1
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Unwinds duplex DNA. Component of the meiotic recombination pathway. Seems to play a role in mediating chromosome homology search, chromosome pairing and synapsis at early stages and probably chromosome crossing-over at later stages in meiosis. Probably is involved in the repair of meiotic double strand breaks (DBSs) and in homologous recombination (343 aa)
     
  0.838
TOP6A
DNA topoisomerase 6 subunit A; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity (441 aa)
     
 
  0.766
MLOC_14192.4
Uncharacterized protein (392 aa)
     
 
  0.759
MLOC_4202.1
Uncharacterized protein (661 aa)
       
      0.754
MLOC_12052.2
Uncharacterized protein (594 aa)
     
   
  0.752
MLOC_80698.1
Uncharacterized protein; Belongs to the AAA ATPase family (250 aa)
     
 
  0.730
MLOC_64847.3
Uncharacterized protein (424 aa)
           
  0.717
Your Current Organism:
Hordeum vulgare
NCBI taxonomy Id: 4513
Other names: H. vulgare, Hordeum vulgare, Hordeum vulgare L., barley
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