STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_06186Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (282 aa)    
Predicted Functional Partners:
TCAP_02639
E3 ubiquitin-protein ligase HRD1.
    
 0.995
TCAP_05044
Protein sel-1.
   
 0.990
TCAP_06176
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.984
TCAP_02649
Protein OS-9.
    
 0.984
TCAP_06281
Cell division control protein 48.
   
 0.982
TCAP_02529
Uncharacterized protein.
    
 0.981
TCAP_05137
ATPase family protein.
   
 0.964
TCAP_01243
Ubiquitin fusion degradation protein 1.
   
 
 0.957
TCAP_06442
Nuclear protein localization protein 4.
    
 
 0.950
TCAP_05834
78 kDa glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.948
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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