STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_05031Uncharacterized protein. (188 aa)    
Predicted Functional Partners:
TCAP_01415
RanBD1 domain-containing protein.
    
 0.763
TCAP_05429
Set1 complex component swd1.
    
 0.706
TCAP_01474
Set1 complex component ash2.
    
 0.700
TCAP_06260
Glutamyl-tRNA(Gln) amidotransferase subunit A.
    
 0.694
TCAP_01881
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.690
TCAP_02603
Nucleoporin.
    
 0.689
TCAP_05291
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
    
 0.686
TCAP_00748
Serine/threonine-protein kinase apg-1.
    
 0.686
TCAP_03048
ANK_REP_REGION domain-containing protein.
    
 0.680
TCAP_01021
ANK_REP_REGION domain-containing protein.
    
 0.680
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
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