STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAP_04157RING-box protein 1. (128 aa)    
Predicted Functional Partners:
TCAP_01735
DNA damage-binding protein 1b.
    
 0.997
TCAP_01590
Elongin-C; Belongs to the SKP1 family.
   
 0.997
TCAP_00774
Cell division control protein 4.
    
 0.989
TCAP_01363
Cullin-1; Belongs to the cullin family.
    
 0.986
TCAP_05256
E3 ubiquitin ligase complex SCF subunit scon-3; Belongs to the SKP1 family.
   
 0.984
TCAP_06041
Serine/threonine-protein kinase TEL1; Belongs to the cullin family.
    
 0.982
TCAP_04068
Cell division cycle protein cdt2.
    
 0.981
TCAP_00267
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.980
TCAP_04389
COP9 signalosome complex subunit 4.
   
 0.979
TCAP_02330
Ubiquitin-conjugating enzyme E2-34 kDa.
   
 0.979
Your Current Organism:
Tolypocladium capitatum
NCBI taxonomy Id: 45235
Other names: Clavaria capitata, Cordyceps capitata, Elaphocordyceps capitata, T. capitatum, Tolypocladium capitatum (Holmsk. : Fr.) Quandt, Kepler & Spatafora, 2014, Torrubia capitata
Server load: low (16%) [HD]