STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_0131Ankyrin; PRINTS: PR00315, Protein synthesis factor, GTP-binding; PROSITE: PS00301, Protein synthesis factor, GTP-binding; PFAM: PF00679, Translation elongation factor EFG/EF2, C-terminal;PF03144, Translation elongation factor EFTu/EF1A, domain 2;PF03764, Translation elongation factor EFG/EF2, domain IV;PF00009, Protein synthesis factor, GTP-binding; SUPERFAMILY: SSF50447, Translation elongation and initiation factors/Ribosomal, beta-barrel;SSF54980, Elongation factor G, III and V; GENE3D: G3DSA:3.30.230.10, Ribosomal protein S5 domain 2-type fold;G3DSA:3.30.70.240, Translation elongati [...] (117 aa)    
Predicted Functional Partners:
Aasi_1754
LRR-repeat protein.
  
 
  0.781
Aasi_1628
Hypothetical protein.
  
 
  0.755
Aasi_0025
Cyclin domain protein F-box protein; PROFILE: PS50165, Excinuclease ABC, C subunit, C-terminal;PS50164, Excinuclease ABC, C subunit, N-terminal; PFAM: PF08459, Excinuclease ABC, C subunit, C-terminal;PF01541, Excinuclease ABC, C subunit, N-terminal; SUPERFAMILY: SSF47781, RuvA domain 2-like;SSF46600, UvrB, C-terminal UvrC-binding;SSF82771, Excinuclease ABC, C subunit, N-terminal; PRODOM: PD005870, Excinuclease ABC, C subunit, C-terminal; SMART: SM00465, Excinuclease ABC, C subunit, N-terminal; TIGRFAMS: TIGR00194, Excinuclease ABC, C subunit.
  
     0.722
Aasi_1383
Hypothetical protein.
  
     0.703
Aasi_1632
Hypothetical protein.
  
     0.691
Aasi_0110
Leucine-rich repeat, ribonuclease inhibitor subtype; PRINTS: PR00080, Short-chain dehydrogenase/reductase SDR;PR00081, Glucose/ribitol dehydrogenase; PANTHER: PTHR19410, Short-chain dehydrogenase/reductase SDR; PROSITE: PS00061, Short-chain dehydrogenase/reductase SDR; PFAM: PF00106, Short-chain dehydrogenase/reductase SDR; SUPERFAMILY: SSF51735, NAD(P)-binding; GENE3D: G3DSA:3.40.50.720, NAD(P)-binding; TIGRFAMS: TIGR01830, 3-oxoacyl-(acyl-carrier-protein) reductase.
  
     0.688
Aasi_1479
Hypothetical protein; PFAM: PF08238, Sel1-like.
  
     0.685
Aasi_0112
Cyclin domain protein F-box protein; PANTHER: PTHR21349, Ribosomal protein L21; PROSITE: PS01169, Ribosomal protein L21; PFAM: PF00829, Ribosomal protein L21; PRODOM: PD003604, Ribosomal protein L21; TIGRFAMS: TIGR00061, Ribosomal protein L21.
  
     0.681
Aasi_0377
Hypothetical protein; PFAM: PF03949, Malic enzyme, NAD-binding;PF00390, Malic enzyme, N-terminal; SUPERFAMILY: SSF51735, NAD(P)-binding; GENE3D: G3DSA:3.40.50.720, NAD(P)-binding.
  
     0.679
Aasi_0725
Hypothetical protein.
  
     0.675
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.