STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aasi_0425Hypothetical protein; SUPERFAMILY: SSF46689, Homeodomain-like. (631 aa)    
Predicted Functional Partners:
Aasi_0053
PRINTS: PR00395, Ribosomal protein S2; PROSITE: PS00963, Ribosomal protein S2; PANTHER: PTHR12534, Ribosomal protein S2, bacterial-type; PFAM: PF00318, Ribosomal protein S2; SUPERFAMILY: SSF52313, Ribosomal protein S2; TIGRFAMS: TIGR01011, Ribosomal protein S2, bacterial-type.
 
 
 
 0.973
Aasi_1325
Hypothetical protein; PFAM: PF01609, Transposase, IS4-like.
  
 
 
 0.794
Aasi_1432
PFAM: PF07251, Protein of unknown function DUF1432.
 
     0.777
Aasi_1341
Hypothetical protein; PRINTS: PR01415, Ankyrin; PROFILE: PS50297, Ankyrin;PS50088, Ankyrin; PFAM: PF00023, Ankyrin; SUPERFAMILY: SSF48403, Ankyrin; GENE3D: G3DSA:1.25.40.20, Ankyrin; SMART: SM00248, Ankyrin.
  
     0.775
Aasi_0523
Hypothetical protein; PROFILE: PS50994, Integrase, catalytic core; PFAM: PF00665, Integrase, catalytic core; SUPERFAMILY: SSF53098, Polynucleotidyl transferase, Ribonuclease H fold.
 
    0.774
Aasi_0160
Hypothetical protein; PFAM: PF00216, Histone-like bacterial DNA-binding protein; SUPERFAMILY: SSF47729, IHF-like DNA-binding; SMART: SM00411, Histone-like bacterial DNA-binding protein; GENE3D: G3DSA:4.10.520.10, Histone-like bacterial DNA-binding protein.
  
     0.771
Aasi_0007
Conserved hypothetical protein.
  
     0.763
Aasi_0596
Hypothetical protein; SUPERFAMILY: SSF53098, Polynucleotidyl transferase, Ribonuclease H fold.
  
     0.762
Aasi_0389
Hypothetical protein; PROFILE: PS51186, GCN5-related N-acetyltransferase; PFAM: PF00583, GCN5-related N-acetyltransferase; SUPERFAMILY: SSF55729, Acyl-CoA N-acyltransferase; GENE3D: G3DSA:3.40.630.30, Acyl-CoA N-acyltransferase.
  
     0.761
Aasi_1704
Hypothetical protein.
  
     0.759
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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