STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
accDHypothetical protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA. (281 aa)    
Predicted Functional Partners:
accA
Hypothetical protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
 0.999
Aasi_0715
Hypothetical protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.999
Aasi_0716
Hypothetical protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.997
Aasi_0199
PROSITE: PS00467, Ribosomal protein L2; PANTHER: PTHR13691:SF5, Ribosomal protein L2, bacterial-type;PTHR13691, Ribosomal protein L2; PFAM: PF03947, Ribosomal protein L2;PF00181, Ribosomal protein L2; SUPERFAMILY: SSF50249, Nucleic acid-binding, OB-fold-like;SSF50104, Translation protein SH3-like; PIR: PIRSF002158, Ribosomal protein L2; GENE3D: G3DSA:2.40.50.140, Nucleic acid-binding, OB-fold;G3DSA:2.30.30.30, Translation protein SH3-like, subgroup; TIGRFAMS: TIGR01171, Ribosomal protein L2, bacterial-type.
  
 
 0.980
Aasi_0115
3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; PRINTS: PR00019, Leucine-rich repeat; SMART: SM00368, Leucine-rich repeat, ribonuclease inhibitor subtype.
  
 
 0.971
fabH
Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.
  
 
 0.971
lpxC
Hypothetical protein; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
  
  
 0.959
Aasi_0029
Catalytic domain of components of various dehydrogenase complexes; PFAM: PF07676, WD40-like Beta Propeller; GENE3D: G3DSA:2.120.10.30, Six-bladed beta-propeller, TolB-like.
     
 0.904
Aasi_1207
Hypothetical protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.880
Aasi_0058
Enoyl-(acyl-carrier-protein) reductase (NADH); PFAM: PF01618, MotA/TolQ/ExbB proton channel.
  
  
 0.776
Your Current Organism:
Amoebophilus asiaticus
NCBI taxonomy Id: 452471
Other names: C. Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus 5a2, Candidatus Amoebophilus asiaticus str. 5a2, Candidatus Amoebophilus asiaticus strain 5a2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.