STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_1299PFAM: Lactate/malate dehydrogenase; KEGG: rba:RB2566 L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (309 aa)    
Predicted Functional Partners:
Oter_0605
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: afw:Anae109_0236 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.990
Oter_0740
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: aeh:Mlg_0697 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.965
Oter_1561
KEGG: rba:RB10277 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
  
 0.964
Oter_4204
PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: gfo:GFO_1616 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta.
  
 0.942
Oter_3293
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: bja:bll6469 malic enzyme.
  
 0.938
Oter_0742
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: gka:GK1302 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 
 0.934
Oter_0972
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
  
 0.931
Oter_3316
PFAM: pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: mja:MJ1231 pyruvate carboxylase subunit B.
    
 0.924
Oter_0631
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
  
 0.918
Oter_2846
PFAM: Transketolase central region; Transketolase domain protein; KEGG: gfo:GFO_0294 pyruvate dehydrogenase E1 component subunit beta.
   
 0.918
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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