STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_2085PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2413 ABC transporter, ATP-binding protein. (244 aa)    
Predicted Functional Partners:
Oter_2084
PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3015 lipoprotein releasing system, transmembrane protein, LolC/E family.
 0.984
Oter_1639
PFAM: protein of unknown function DUF214; KEGG: plt:Plut_1336 ABC transporter efflux protein.
 
   0.939
Oter_1640
PFAM: protein of unknown function DUF214; KEGG: cch:Cag_0990 ABC transporter efflux protein.
 
   0.939
Oter_3938
PFAM: protein of unknown function DUF214; KEGG: pla:Plav_2534 protein of unknown function DUF214.
 
 0.935
Oter_0319
PFAM: protein of unknown function DUF214; KEGG: pth:PTH_1456 ABC-type antimicrobial peptide transport system, permease component.
 
 
   0.929
Oter_3645
PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_3235 protein of unknown function DUF214.
 
 
   0.929
Oter_0320
PFAM: protein of unknown function DUF214; KEGG: sfr:Sfri_1812 protein of unknown function DUF214.
 
 
   0.928
Oter_1681
Permease; TIGRFAM: permease; PFAM: protein of unknown function DUF214; KEGG: gvi:gll1201 unknown protein.
  
 
 0.925
Oter_2205
PFAM: protein of unknown function DUF214; KEGG: amr:AM1_D0150 ABC transporter, permease protein.
  
 
 0.925
Oter_3937
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lpf:lpl0880 hypothetical protein.
  
  
 
0.913
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.