STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3378PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: xcb:XC_4208 beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (919 aa)    
Predicted Functional Partners:
Oter_2925
Beta-galactosidase; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 35; KEGG: bth:BT_0290 beta-galactosidase precursor; Belongs to the glycosyl hydrolase 35 family.
 
 
 0.934
Oter_1364
Beta-galactosidase; PFAM: glycoside hydrolase family 35; KEGG: bth:BT_4160 beta-galactosidase precursor.
 
 
 0.933
Oter_3614
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sus:Acid_4607 beta-galactosidase.
  
  
 
0.929
Oter_2051
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sbm:Shew185_3338 glycoside hydrolase family 2 sugar binding; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.928
Oter_2929
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: fjo:Fjoh_3111 glycoside hydrolase family 2, sugar binding; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.922
Oter_0992
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: hau:Haur_2520 glycoside hydrolase family 2 sugar binding; Belongs to the glycosyl hydrolase 2 family.
  
  
 
0.919
Oter_1363
Hypothetical protein; KEGG: sus:Acid_1472 glycoside hydrolase, clan GH-D.
 
 
 0.918
Oter_2301
Alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; KEGG: sde:Sde_1593 ribosomal protein S32.
 
 
 0.918
Oter_3220
Alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; Ig family protein; KEGG: bth:BT_3592 alpha-galactosidase precursor.
 
 
 0.917
Oter_1386
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.905
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.