STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_3585PFAM: UspA domain protein; KEGG: sus:Acid_5624 Mn2+/Fe2+ transporter, NRAMP family. (150 aa)    
Predicted Functional Partners:
mntH
Mn2+/Fe2+ transporter, NRAMP family; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.789
ade
Adenine deaminase; PFAM: amidohydrolase; KEGG: bra:BRADO4947 putative adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.553
Oter_3587
PFAM: regulatory protein MarR; iron dependent repressor; FeoA family protein; KEGG: cgt:cgR_0157 hypothetical protein.
     
 0.515
Oter_4195
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_0717 haloacid dehalogenase domain protein hydrolase.
  
    0.462
Oter_0776
KEGG: bra:BRADO5752 putative sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; GAF domain protein.
  
  
 0.451
Oter_2662
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: nfa:nfa53680 putative methylated-DNA:protein-cysteine methyltransferase.
  
    0.421
Oter_3471
TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: msm:MSMEG_4928 methylated-DNA--protein-cysteine methyltransferase.
  
    0.421
Oter_0945
KEGG: ava:Ava_4753 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
  
 0.417
Oter_0287
PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_0790 glycosyl transferase, group 1.
  
   
 0.405
Oter_4518
KEGG: psa:PST_1576 hypothetical protein.
   
  
 0.401
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.