STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oter_4570PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: pcu:pc0720 putative serine/threonine phosphoprotein phosphatase. (295 aa)    
Predicted Functional Partners:
Oter_4569
Mn2+-dependent serine/threonine protein kinase.
      0.977
Oter_4204
PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain protein; KEGG: gfo:GFO_1616 2-oxoisovalerate dehydrogenase E1 component subunits alpha and beta.
  
 0.937
Oter_0358
PFAM: WD-40 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: afw:Anae109_3558 protein kinase.
 
 
 0.882
Oter_2651
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: mxa:MXAN_5696 serine/threonine protein kinase.
 
 
 0.851
Oter_4031
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ppd:Ppro_3242 sun protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
  
 0.850
Oter_4175
PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: aba:Acid345_2310 serine/threonine protein kinase with TPR repeats.
 
 
 0.846
Oter_2424
PFAM: protein kinase; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rba:RB12310 serine/threonine-protein kinase.
 
 
 0.836
Oter_1389
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rba:RB631 serine/threonine protein kinase.
 
 
 0.828
Oter_4571
PFAM: AIG2 family protein; KEGG: vvy:VV0430 hypothetical protein.
       0.773
Oter_1412
PFAM: formyl transferase domain protein; KEGG: bxe:Bxe_A2388 hypothetical protein.
  
   0.764
Your Current Organism:
Opitutus terrae
NCBI taxonomy Id: 452637
Other names: O. terrae PB90-1, Opitutus terrae DSM 11246, Opitutus terrae PB90-1, Verrucomicrobiales PB90-1, Verrucomicrobiales str. PB90-1
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