STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSE_01590Hypothetical protein. (487 aa)    
Predicted Functional Partners:
KSE_56700
Putative glycoside hydrolase.
 
 0.800
KSE_70200
Putative endoglucanase precursor; Protein synonym:cellulase; protein synonym:endo-1,4-beta-glucanase.
 
 0.799
KSE_34910
Hypothetical protein.
  
     0.720
KSE_64640
Putative exoglucanase; Protein synonym:1,4-beta-cellobiohydrolase; Belongs to the glycosyl hydrolase family 6.
 
 0.689
KSE_69900
Hypothetical protein.
 
   
 0.671
KSE_27860
Hypothetical protein.
  
     0.669
chiII
Putative chitinase II; Belongs to the glycosyl hydrolase 18 family.
  
   
 0.668
KSE_59340
Putative cellulose-binding protein; Similar to P40 in Streptomyces halstedii (O07862).
  
     0.666
KSE_69000
Putative endoglucanase precursor; Protein synonym:cellulase; protein synonym:endo-1,4-beta-glucanase.
 
 0.662
KSE_70800
Hypothetical protein.
  
   
 0.650
Your Current Organism:
Kitasatospora setae
NCBI taxonomy Id: 452652
Other names: K. setae KM-6054, Kitasatospora setae KM-6054, Kitasatospora setae str. KM-6054, Kitasatospora setae strain KM-6054
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