STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSE_11160Hypothetical protein. (290 aa)    
Predicted Functional Partners:
KSE_06990
Hypothetical protein.
 
   
 0.765
KSE_19380
Hypothetical protein.
 
     0.734
abfB
Putative alpha-L-arabinofuranosidase precursor; Protein synonym:alpha-N-arabinofuranosidase; protein synonym:arabinosidase.
   
 0.700
xynB
Putative endo-1,4-beta-xylanase B precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.649
KSE_62300
Hypothetical protein.
  
     0.628
KSE_11150
Hypothetical protein.
       0.625
xynA2
Putative endo-1,4-beta-xylanase A precursor.
 
 0.575
KSE_22740
Hypothetical protein.
  
     0.494
KSE_69000
Putative endoglucanase precursor; Protein synonym:cellulase; protein synonym:endo-1,4-beta-glucanase.
 
 
 0.491
xynA1
Putative endo-1,4-beta-xylanase A precursor.
 
   
 0.490
Your Current Organism:
Kitasatospora setae
NCBI taxonomy Id: 452652
Other names: K. setae KM-6054, Kitasatospora setae KM-6054, Kitasatospora setae str. KM-6054, Kitasatospora setae strain KM-6054
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.