STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KSE_49220Hypothetical protein. (464 aa)    
Predicted Functional Partners:
KSE_49230
Hypothetical protein.
  
0.922
KSE_51100
Hypothetical protein.
 
 
 0.848
KSE_51170
Putative signaling protein.
 
  
 0.813
KSE_43960
Putative signaling protein.
 
 
 0.795
KSE_45840
Hypothetical protein.
 
 0.793
KSE_07040
Putative two-component hybrid sensor and regulator.
 
 
 0.767
KSE_49240
Hypothetical protein.
       0.756
KSE_29750
Hypothetical protein.
 
 
 0.734
rsrA
Putative anti-sigma factor.
       0.721
KSE_27850
Putative signaling protein.
  
 0.707
Your Current Organism:
Kitasatospora setae
NCBI taxonomy Id: 452652
Other names: K. setae KM-6054, Kitasatospora setae KM-6054, Kitasatospora setae str. KM-6054, Kitasatospora setae strain KM-6054
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.