STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI95310.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
BAI95309.1
Putative protein-S-isoprenylcysteine methyltransferase.
 
    0.949
prsA-2
Ribose-phosphate pyrophosphokinase; Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.
 
     0.578
BAI95312.1
Putative thymidine phosphorylase.
 
     0.562
BAI95311.1
Putative exonuclease of the beta-lactamase fold involved in RNA processing.
 
     0.559
copB-2
Uncharacterized protein involved in copper resistance.
 
     0.519
BAI95349.1
Conserved hypothetical protein.
  
     0.487
copB
Uncharacterized protein involved in copper resistance.
 
     0.443
BAI95338.1
Putative MFS permease; Permease of the major facilitator superfamily / arabinose efflux permease.
 
     0.440
BAI95348.1
Cytochrome c family protein.
  
     0.420
BAI95337.1
Putative metal-binding protein.
 
     0.413
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.