STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI96341.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
BAI96340.1
Putative xylanase / chitin deacetylase.
 
     0.969
BAI96342.1
Putative glycosyltransferase; Group 1.
 
     0.969
BAI96343.1
Hypothetical protein.
 
     0.969
exeA
General secretion pathway protein A; Type II secretory pathway, component ExeA (putative ATPase).
 
     0.967
asnB
Asparagine synthase; Glutamine-hydrolyzing.
 
     0.962
wza
Periplasmic protein involved in polysaccharide export.
 
     0.953
BAI96336.1
Putative exopolysaccharide biosynthesis protein.
 
     0.953
BAI96337.1
Putative exopolysaccharide biosynthesis protein; ATPase involved in chromosome partitioning.
 
     0.953
lysA
Diaminopimelate decarboxylase.
 
     0.867
entF
acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (EC 5.1.1.11).
 
     0.843
Your Current Organism:
Sphingobium japonicum
NCBI taxonomy Id: 452662
Other names: S. japonicum UT26S, Sphingobium japonicum UT26, Sphingobium japonicum UT26S, Sphingobium japonicum str. UT26S, Sphingobium japonicum strain UT26S
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