STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Achl_0351TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; KEGG: art:Arth_0037 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family. (304 aa)    
Predicted Functional Partners:
Achl_0349
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bra:BRADO1564 (D)-glucarate dehydratase 1.
 
  
 0.990
Achl_0350
PFAM: Aldehyde Dehydrogenase; KEGG: art:Arth_0036 aldehyde dehydrogenase.
 
 
  0.985
Achl_0035
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sen:SACE_4841 mandelate racemase/muconate lactonizing enzyme.
 
  
 0.960
Achl_2097
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: art:Arth_0479 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein.
 
  
 0.959
Achl_0038
PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: aau:AAur_0037 mandelate racemase.
 
  
 0.957
Achl_3137
PFAM: dihydrodipicolinate synthetase; KEGG: art:Arth_3337 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
  
  
 
0.913
Achl_0352
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: art:Arth_0038 transcriptional regulator, LysR family.
 
    0.774
Achl_0354
KEGG: msm:MSMEG_0123 hypothetical protein.
 
     0.686
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
  
 0.551
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
 
  
 0.536
Your Current Organism:
Pseudarthrobacter chlorophenolicus
NCBI taxonomy Id: 452863
Other names: Arthrobacter chlorophenolicus A6, P. chlorophenolicus A6, Pseudarthrobacter chlorophenolicus A6
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.