node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplM | rpmA | Achl_2631 | Achl_2144 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplM | rpsD | Achl_2631 | Achl_2018 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
rplM | rpsE | Achl_2631 | Achl_2671 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.998 |
rplM | rpsF | Achl_2631 | Achl_3891 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rplM | rpsG | Achl_2631 | Achl_2694 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rplM | rpsI | Achl_2631 | Achl_2630 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S9; KEGG: aau:AAur_2904 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
rplM | rpsK | Achl_2631 | Achl_2656 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.998 |
rplM | rpsO | Achl_2631 | Achl_1438 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
rplM | rpsP | Achl_2631 | Achl_2223 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S16; KEGG: aau:AAur_2452 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.997 |
rplM | rpsQ | Achl_2631 | Achl_2678 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.997 |
rpmA | rplM | Achl_2144 | Achl_2631 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rpmA | rpsD | Achl_2144 | Achl_2018 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | RNA-binding S4 domain protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.996 |
rpmA | rpsE | Achl_2144 | Achl_2671 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.995 |
rpmA | rpsF | Achl_2144 | Achl_3891 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.999 |
rpmA | rpsG | Achl_2144 | Achl_2694 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.996 |
rpmA | rpsI | Achl_2144 | Achl_2630 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | PFAM: ribosomal protein S9; KEGG: aau:AAur_2904 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.998 |
rpmA | rpsK | Achl_2144 | Achl_2656 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.996 |
rpmA | rpsO | Achl_2144 | Achl_1438 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.998 |
rpmA | rpsP | Achl_2144 | Achl_2223 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | PFAM: ribosomal protein S16; KEGG: aau:AAur_2452 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.996 |
rpmA | rpsQ | Achl_2144 | Achl_2678 | PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.993 |