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rpsO protein (Arthrobacter chlorophenolicus) - STRING interaction network
"rpsO" - 30S ribosomal protein S15 in Arthrobacter chlorophenolicus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
rpsO30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA (89 aa)    
Predicted Functional Partners:
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (147 aa)
 
 
  0.998
rpsB
PFAM- ribosomal protein S2; KEGG- art-Arth_1367 SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family (291 aa)
 
 
  0.997
rpmA
PFAM- ribosomal protein L27; KEGG- art-Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family (87 aa)
 
 
  0.996
rplO
50S ribosomal protein L15; Binds to the 23S rRNA (161 aa)
   
 
  0.996
rplP
50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs (138 aa)
   
 
  0.996
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (119 aa)
 
 
  0.996
rplB
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (279 aa)
   
 
  0.996
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (206 aa)
   
 
  0.995
rplE
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (193 aa)
   
 
  0.995
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation (276 aa)
   
 
  0.995
Your Current Organism:
Arthrobacter chlorophenolicus
NCBI taxonomy Id: 452863
Other names: A. chlorophenolicus A6, Arthrobacter chlorophenolicus, Arthrobacter chlorophenolicus A6, Arthrobacter chlorophenolicus str. A6, Arthrobacter chlorophenolicus strain A6
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