rpsT protein (Pseudarthrobacter chlorophenolicus)

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rpsT

Ribosomal protein S20; Binds directly to 16S ribosomal RNA. (86 aa)

Predicted Functional Partners:

rpsF

0.999

rplU

0.997

rpsO

0.996

rpsP

0.996

rplM

0.995

rpmA

0.994

rpsI

0.994

rplF

0.993

rpsR

0.993

rplY

0.992

Your Current Organism:

Pseudarthrobacter chlorophenolicus

NCBI taxonomy Id: 452863
Other names: Arthrobacter chlorophenolicus A6, P. chlorophenolicus A6, Pseudarthrobacter chlorophenolicus A6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplF	rplM	Achl_2673	Achl_2631	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplF	rplU	Achl_2673	Achl_2145	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.996
rplF	rplY	Achl_2673	Achl_1289	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.986
rplF	rpmA	Achl_2673	Achl_2144	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.996
rplF	rpsF	Achl_2673	Achl_3891	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplF	rpsI	Achl_2673	Achl_2630	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	PFAM: ribosomal protein S9; KEGG: aau:AAur_2904 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.998
rplF	rpsO	Achl_2673	Achl_1438	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.996
rplF	rpsP	Achl_2673	Achl_2223	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	PFAM: ribosomal protein S16; KEGG: aau:AAur_2452 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.996
rplF	rpsR	Achl_2673	Achl_3889	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.994
rplF	rpsT	Achl_2673	Achl_1979	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993
rplM	rplF	Achl_2631	Achl_2673	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L6 signature 1; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.999
rplM	rplU	Achl_2631	Achl_2145	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplM	rplY	Achl_2631	Achl_1289	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.995
rplM	rpmA	Achl_2631	Achl_2144	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein L27; KEGG: art:Arth_2390 50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplM	rpsF	Achl_2631	Achl_3891	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.999
rplM	rpsI	Achl_2631	Achl_2630	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S9; KEGG: aau:AAur_2904 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	Achl_2631	Achl_1438	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.998
rplM	rpsP	Achl_2631	Achl_2223	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	PFAM: ribosomal protein S16; KEGG: aau:AAur_2452 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rplM	rpsR	Achl_2631	Achl_3889	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rplM	rpsT	Achl_2631	Achl_1979	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.995