STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Achl_3373PFAM: major facilitator superfamily MFS_1; KEGG: aau:AAur_3973 putative transmembrane efflux protein (MFS). (482 aa)    
Predicted Functional Partners:
Achl_3374
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; KEGG: aau:AAur_3974 putative DNA-binding protein.
       0.549
Achl_3501
PFAM: major facilitator superfamily MFS_1; KEGG: art:Arth_3774 major facilitator superfamily MFS_1.
  
     0.507
Your Current Organism:
Pseudarthrobacter chlorophenolicus
NCBI taxonomy Id: 452863
Other names: Arthrobacter chlorophenolicus A6, P. chlorophenolicus A6, Pseudarthrobacter chlorophenolicus A6
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.