STRINGSTRING
ORUFI04G24060.1 protein (Oryza rufipogon) - STRING interaction network
"ORUFI04G24060.1" - annotation not available in Oryza rufipogon
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORUFI04G24060.1annotation not available (236 aa)    
Predicted Functional Partners:
ORUFI04G09740.1
annotation not available (1130 aa)
           
  0.873
ORUFI04G15810.1
annotation not available (1045 aa)
           
  0.841
ORUFI02G17860.1
annotation not available (1064 aa)
           
  0.585
ORUFI01G23850.2
Cytokinin riboside 5’-monophosphate phosphoribohydrolase; Cytokinin-activating enzyme working in the direct activation pathway. Phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms (246 aa)
           
  0.533
ORUFI08G08160.1
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues; Belongs to the glycosyl hydrolase 16 family (290 aa)
           
  0.495
ORUFI07G27510.1
annotation not available (534 aa)
           
  0.489
ORUFI05G28800.1
Auxin efflux carrier component; May act as a component of the auxin efflux carrier (591 aa)
           
  0.489
ORUFI08G22440.1
annotation not available (418 aa)
           
  0.478
ORUFI07G24970.1
annotation not available (304 aa)
           
  0.463
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon, Oryza rufipogon Griff., common wild rice
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