STRINGSTRING
ORUFI09G03940.1 protein (Oryza rufipogon) - STRING interaction network
"ORUFI09G03940.1" - annotation not available in Oryza rufipogon
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORUFI09G03940.1annotation not available (475 aa)    
Predicted Functional Partners:
ORUFI11G02560.1
annotation not available (391 aa)
       
  0.940
ORUFI01G47340.1
annotation not available (506 aa)
       
  0.904
ORUFI03G29880.1
annotation not available (589 aa)
       
  0.825
ORUFI01G35500.1
annotation not available (634 aa)
       
  0.806
ORUFI07G12390.1
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (648 aa)
           
  0.751
ORUFI01G06610.1
annotation not available (681 aa)
       
  0.741
ORUFI01G39150.1
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (567 aa)
           
  0.589
ORUFI01G02050.1
annotation not available (128 aa)
           
  0.589
ORUFI05G02200.2
annotation not available (179 aa)
           
  0.472
ORUFI10G19840.1
annotation not available (816 aa)
           
  0.402
Your Current Organism:
Oryza rufipogon
NCBI taxonomy Id: 4529
Other names: O. rufipogon, Oryza rufipogon, Oryza rufipogon Griff., common wild rice
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