STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAC8NAC domain-containing protein 74; Probable transcription factor involved in stress response (489 aa)    
Predicted Functional Partners:
OsJ_00952
Os01g0225600 protein; Putative late embryogenesis-abundant protein; Uncharacterized protein
      
 0.616
OS08T0435700-00
Os08g0435700 protein; Putative MYB transcription factor
      
 0.616
TIP1-2
Probable aquaporin TIP1-2; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm (By similarity)
      
 0.596
PIP2-1
Probable aquaporin PIP2-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes
      
 0.594
PIP1-3
Aquaporin PIP 1-3; Water channel required to facilitate the transport of water across cell membrane. Increases the capacity for root water uptake under water deficit. May play a role in drought avoidance in upland rice
      
 0.593
OsJ_34262
Myb-like DNA-binding domain containing protein, expressed; Os11g0558200 protein; cDNA clone:002-172-B09, full insert sequence
      
 0.591
PIP2-3
Probable aquaporin PIP2-3; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes
      
 0.573
OS01T0229000-00
Os01g0229000 protein; MYB23 protein
      
 0.563
OS12T0238000-00
Os12g0238000 protein; Myb-like DNA-binding domain containing protein, expressed; Os12g0238000 protein
      
 0.563
TIP4-3
Probable aquaporin TIP4-3; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm (By similarity); Belongs to the MIP/aquaporin (TC 1.A.8) family. TIP (TC 1.A.8.10) subfamily
      
 0.523
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa L., red rice, rice
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