STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDR10ABC transporter G family member 34; May be a general defense protein (1468 aa)    
Predicted Functional Partners:
OS01T0880200-01
Hexosyltransferase; Glycogenin-like protein; Os01g0880200 protein ; Belongs to the glycosyltransferase 8 family
      
 0.865
OS02T0655700-01
Amino acid permease-like; Os02g0655700 protein
   
 
 0.567
OS01T0925100-01
Os01g0925100 protein
      
 0.549
OsJ_00429
cDNA clone:001-007-A09, full insert sequence; Os01g0155000 protein; Putative PrMC3; Uncharacterized protein; cDNA clone:001-007-A09, full insert sequence; cDNA clone:J033053C20, full insert sequence
   
  
 0.527
OS01T0902300-01
B1065G12.16 protein; Os01g0902300 protein; Putative PrMC3
   
  
 0.500
OS01T0700900-01
Os01g0700900 protein
      
 0.491
OS09T0360900-01
Os09g0360900 protein; ATP-binding cassette transporter AtABCA1-like protein; Os09g0360900 protein
      
 0.461
OS01T0114700-00
Os01g0114700 protein
   
 
 0.451
OS01T0115900-00
annotation not available
   
 
 0.451
OS01T0879200-01
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism
   
  
 0.447
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa, Oryza sativa L., red rice, rice
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