STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDR8ABC transporter G family member 37; May be a general defense protein (1388 aa)    
Predicted Functional Partners:
OsJ_23573
Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
   
 
 0.788
OsJ_27158
Cytochrome b5-like; Os08g0386300 protein
   
  
 0.776
OsJ_07297
Os02g0585200 protein; Putative uncharacterized protein OSJNBb0056I22.16
   
  
 0.773
OS03T0152000-01
Heavy metal-associated domain containing protein, expressed; Os03g0152000 protein
      
 0.772
ABCG43
ABC transporter G family member 43; May be a general defense protein (By similarity). ABC transporter that confers high tolerance to cadmium in yeast; Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily
   
  
0.570
OS02T0655700-01
Amino acid permease-like; Os02g0655700 protein
   
 
 0.567
OsJ_04998
Os02g0102200 protein; Putative amino acid transporter
   
  
 0.566
OS02T0727100-01
Os02g0727100 protein; Putative amino acid transporter; cDNA clone:J023006P21, full insert sequence
   
  
 0.566
OS03T0817200-01
Os03g0817200 protein; Putative amino acid transporter; Transmembrane amino acid transporter protein, expressed
   
  
 0.566
OsJ_18601
Os05g0424000 protein; Putative amino acid transporter
   
  
 0.566
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa, Oryza sativa L., red rice, rice
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