STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RACK1AGuanine nucleotide-binding protein subunit beta-like protein A; Component of the RACK1 regulatory proteins that functions in innate immunity by interacting with multiple proteins in the RAC1 immune complex. Acts as positive regulator of reactive oxygen species (ROS) production and is required for resistance against rice blast (M.grisea) infection (334 aa)    
Predicted Functional Partners:
OsJ_11524
40S ribosomal protein S3, putative, expressed; Os03g0577000 protein; Putative ribosomal protein; cDNA clone:006-205-G04, full insert sequence; cDNA clone:J023061B16, full insert sequence ; Belongs to the universal ribosomal protein uS3 family
   
 
 0.997
OS05T0556900-01
Os05g0556900 protein; Putative ribosomal protein L35A; cDNA clone:001-019-B02, full insert sequence; cDNA clone:J033107H21, full insert sequence
   
   0.997
OS10T0411700-01
Os03g0167100 protein; Os10g0411700 protein
   
 
 0.997
OsJ_18924
40S ribosomal protein S26; Os05g0477300 protein; cDNA clone:001-042-D01, full insert sequence; cDNA clone:002-157-A02, full insert sequence; cDNA clone:002-175-H04, full insert sequence; cDNA clone:J013091A22, full insert sequence ; Belongs to the eukaryotic ribosomal protein eS26 family
   
 
 0.996
OS08T0559200-01
cDNA clone:001-030-B04, full insert sequence; Os08g0559200 protein; Putative 40S ribosomal protein S25 (RPS25B); cDNA clone:001-030-B04, full insert sequence; cDNA clone:J013120F23, full insert sequence
   
 
 0.996
OS12T0406200-01
40S ribosomal protein S3a ; Belongs to the eukaryotic ribosomal protein eS1 family
   
 
 0.996
OsJ_04856
Os01g0962600 protein; Putative 40S ribosomal protein S10; Uncharacterized protein
   
 
 0.995
OsJ_08042
Os02g0699600 protein; Putative 60S ribosomal protein L12; cDNA clone:J033076B01, full insert sequence ; Belongs to the universal ribosomal protein uL11 family
   
 
 0.995
OsJ_16070
Os04g0605900 protein; cDNA clone:J033044G24, full insert sequence
   
 
 0.995
OS07T0229900-02
40S ribosomal protein S12 ; Belongs to the eukaryotic ribosomal protein eS12 family
   
 
 0.995
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa, Oryza sativa L., red rice, rice
Server load: low (8%) [HD]