STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAC6Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation (197 aa)    
Predicted Functional Partners:
OsJ_06259
Os02g0281000 protein; Putative PKG-Ib
  
 0.992
OS03T0328000-01
Os03g0328000 protein ; Belongs to the DOCK family
   
 0.937
RGB1
Guanine nucleotide-binding protein subunit beta; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction
   
 0.884
OsJ_25346
cDNA, clone: J075182P04, full insert sequence; Os07g0645000 protein; Putative uncharacterized protein OJ1458_B07.124; cDNA, clone: J075182P04, full insert sequence
   
    0.878
OsJ_04519
cDNA clone:J023112G04, full insert sequence; Os01g0913600 protein; Putative Rac GDP-dissociation inhibitor 1; Uncharacterized protein; cDNA clone:J023112G04, full insert sequence
   
 0.875
OS02T0719000-01
Os02g0719000 protein; cDNA clone:J033007K19, full insert sequence
   
 0.875
OsJ_21142
Putative Rho GDP dissociation inhibitor 2; cDNA clone:001-034-H12, full insert sequence
   
 0.875
BC1L4
COBRA-like protein 3; Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface (By similarity)
   
    0.868
B'KAPPA
Os05g0555100 protein; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response . Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance . Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance
   
 0.848
OS03T0143851-01
Os03g0143851 protein; PIROGI, putative, expressed
   
 0.839
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa L., red rice, rice
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