Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B'KAPPA | OsJ_06259 | OS05T0555100-01 | OS02T0281000-01 | Os05g0555100 protein; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response . Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance . Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance | Os02g0281000 protein; Putative PKG-Ib | 0.999 |
| B'KAPPA | OsJ_25346 | OS05T0555100-01 | OS07T0645000-01 | Os05g0555100 protein; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response . Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance . Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance | cDNA, clone: J075182P04, full insert sequence; Os07g0645000 protein; Putative uncharacterized protein OJ1458_B07.124; cDNA, clone: J075182P04, full insert sequence | 0.701 |
| B'KAPPA | RAC6 | OS05T0555100-01 | OS02T0120800-01 | Os05g0555100 protein; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response . Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance . Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.848 |
| BC1L4 | OsJ_25346 | OS05T0386800-01 | OS07T0645000-01 | COBRA-like protein 3; Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface (By similarity) | cDNA, clone: J075182P04, full insert sequence; Os07g0645000 protein; Putative uncharacterized protein OJ1458_B07.124; cDNA, clone: J075182P04, full insert sequence | 0.892 |
| BC1L4 | RAC6 | OS05T0386800-01 | OS02T0120800-01 | COBRA-like protein 3; Involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. May act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface (By similarity) | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.868 |
| OS02T0719000-01 | OS03T0328000-01 | OS02T0719000-01 | OS03T0328000-01 | Os02g0719000 protein; cDNA clone:J033007K19, full insert sequence | Os03g0328000 protein ; Belongs to the DOCK family | 0.592 |
| OS02T0719000-01 | RAC6 | OS02T0719000-01 | OS02T0120800-01 | Os02g0719000 protein; cDNA clone:J033007K19, full insert sequence | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.875 |
| OS03T0143851-01 | OS03T0328000-01 | OS03T0143851-01 | OS03T0328000-01 | Os03g0143851 protein; PIROGI, putative, expressed | Os03g0328000 protein ; Belongs to the DOCK family | 0.672 |
| OS03T0143851-01 | RAC6 | OS03T0143851-01 | OS02T0120800-01 | Os03g0143851 protein; PIROGI, putative, expressed | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.839 |
| OS03T0328000-01 | OS02T0719000-01 | OS03T0328000-01 | OS02T0719000-01 | Os03g0328000 protein ; Belongs to the DOCK family | Os02g0719000 protein; cDNA clone:J033007K19, full insert sequence | 0.592 |
| OS03T0328000-01 | OS03T0143851-01 | OS03T0328000-01 | OS03T0143851-01 | Os03g0328000 protein ; Belongs to the DOCK family | Os03g0143851 protein; PIROGI, putative, expressed | 0.672 |
| OS03T0328000-01 | OsJ_04519 | OS03T0328000-01 | OS01T0913600-01 | Os03g0328000 protein ; Belongs to the DOCK family | cDNA clone:J023112G04, full insert sequence; Os01g0913600 protein; Putative Rac GDP-dissociation inhibitor 1; Uncharacterized protein; cDNA clone:J023112G04, full insert sequence | 0.592 |
| OS03T0328000-01 | OsJ_21142 | OS03T0328000-01 | OS06T0318300-02 | Os03g0328000 protein ; Belongs to the DOCK family | Putative Rho GDP dissociation inhibitor 2; cDNA clone:001-034-H12, full insert sequence | 0.592 |
| OS03T0328000-01 | RAC6 | OS03T0328000-01 | OS02T0120800-01 | Os03g0328000 protein ; Belongs to the DOCK family | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.937 |
| OsJ_04519 | OS03T0328000-01 | OS01T0913600-01 | OS03T0328000-01 | cDNA clone:J023112G04, full insert sequence; Os01g0913600 protein; Putative Rac GDP-dissociation inhibitor 1; Uncharacterized protein; cDNA clone:J023112G04, full insert sequence | Os03g0328000 protein ; Belongs to the DOCK family | 0.592 |
| OsJ_04519 | RAC6 | OS01T0913600-01 | OS02T0120800-01 | cDNA clone:J023112G04, full insert sequence; Os01g0913600 protein; Putative Rac GDP-dissociation inhibitor 1; Uncharacterized protein; cDNA clone:J023112G04, full insert sequence | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.875 |
| OsJ_06259 | B'KAPPA | OS02T0281000-01 | OS05T0555100-01 | Os02g0281000 protein; Putative PKG-Ib | Os05g0555100 protein; B regulatory subunit of phosphatase 2A (PP2A) involved in salt stress response . Under salt stress conditions, required for the catalytic activity of PP2A and the dephosphorylation of SIT1, a negative regulator of salt tolerance . Dephosphorylation of SIT1 turns off salt-induced SIT1 activity directly, which has a positive effect on salt tolerance | 0.999 |
| OsJ_06259 | RAC6 | OS02T0281000-01 | OS02T0120800-01 | Os02g0281000 protein; Putative PKG-Ib | Rac-like GTP-binding protein 6; Inactive GDP-bound Rho GTPases reside in the cytosol, are found in a complex with Rho GDP-dissociation inhibitors (Rho GDIs), and are released from the GDI protein in order to translocate to membranes upon activation | 0.992 |
| OsJ_06259 | RGB1 | OS02T0281000-01 | OS03T0669200-01 | Os02g0281000 protein; Putative PKG-Ib | Guanine nucleotide-binding protein subunit beta; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein- effector interaction | 0.999 |
| OsJ_21142 | OS03T0328000-01 | OS06T0318300-02 | OS03T0328000-01 | Putative Rho GDP dissociation inhibitor 2; cDNA clone:001-034-H12, full insert sequence | Os03g0328000 protein ; Belongs to the DOCK family | 0.592 |
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