STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G6PGH16-phosphogluconate dehydrogenase, decarboxylating 1; Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH (480 aa)    
Predicted Functional Partners:
OsJ_04614
cDNA clone:001-203-A10, full insert sequence; Os01g0926300 protein; Putative transaldolase; Uncharacterized protein; cDNA clone:001-203-A10, full insert sequence; cDNA clone:J023139A20, full insert sequence
  
 
 0.994
OsJ_26073
Putative transaldolase ToTAL2; cDNA clone:J033038K01, full insert sequence
  
 
 0.990
OS06T0114650-01
annotation not available
    
 0.968
RPE
Ribulose-phosphate 3-epimerase, chloroplastic; Catalyzes the reversible epimerization of D-ribulose 5- phosphate to D-xylulose 5-phosphate
  
 0.966
OsJ_12816
Os03g0781400 protein; Ribose 5-phosphate isomerase, putative, expressed; cDNA clone:J013082L17, full insert sequence
  
 
 0.966
OsJ_14213
OSJNBa0023J03.8 protein; Os04g0306400 protein; cDNA clone:J033129E13, full insert sequence
  
 
 0.966
OsJ_23301
cDNA clone:001-034-G01, full insert sequence; Os07g0176900 protein; Putative ribose-5-phosphate isomerase; cDNA clone:001-034-G01, full insert sequence
  
 
 0.966
OS09T0505700-02
Ribulose-phosphate 3-epimerase, cytoplasmic isoform; Catalyzes the reversible epimerization of D-ribulose 5- phosphate to D-xylulose 5-phosphate; Belongs to the ribulose-phosphate 3-epimerase family
  
 0.966
OsJ_010814
Probable 6-phosphogluconolactonase 1; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate
  
 
 0.965
OsJ_024061
Probable 6-phosphogluconolactonase 2; Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate
  
 
 0.965
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa, Oryza sativa L., red rice, rice
Server load: low (8%) [HD]