Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADL1 | G1L2 | OS02T0709400-01 | OS06T0672400-01 | Calpain-type cysteine protease ADL1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | 0.567 |
| ADL1 | OS08T0103000-01 | OS02T0709400-01 | OS08T0103000-01 | Calpain-type cysteine protease ADL1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active | Serine/threonine protein kinase-like | 0.554 |
| ADL1 | OsJ_28883 | OS02T0709400-01 | OS09T0326100-01 | Calpain-type cysteine protease ADL1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active | CLV1 receptor kinase-like; Os09g0326100 protein; cDNA clone:J023022K03, full insert sequence | 0.567 |
| ADL1 | SRP19 | OS02T0709400-01 | OS06T0342100-01 | Calpain-type cysteine protease ADL1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active | Signal recognition particle 19 kDa protein; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP | 0.474 |
| ATG8C | G1L2 | OS08T0191600-01 | OS06T0672400-01 | Autophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | 0.613 |
| ATG8C | OS08T0103000-01 | OS08T0191600-01 | OS08T0103000-01 | Autophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family | Serine/threonine protein kinase-like | 0.455 |
| ATG8C | OsJ_28883 | OS08T0191600-01 | OS09T0326100-01 | Autophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family | CLV1 receptor kinase-like; Os09g0326100 protein; cDNA clone:J023022K03, full insert sequence | 0.586 |
| ATG8C | SRP19 | OS08T0191600-01 | OS06T0342100-01 | Autophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family | Signal recognition particle 19 kDa protein; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP | 0.564 |
| G1L2 | ADL1 | OS06T0672400-01 | OS02T0709400-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Calpain-type cysteine protease ADL1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active | 0.567 |
| G1L2 | ATG8C | OS06T0672400-01 | OS08T0191600-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Autophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family | 0.613 |
| G1L2 | HD2 | OS06T0672400-01 | OS07T0695100-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Two-component response regulator-like PRR37; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering. Controls flowering time by negatively regulating the expression of HD3A. Acts downstream of the phytochrome B to repress the expression of EHD1, an activator of the flowering promoter genes HD3A and RFT1. Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The partic [...] | 0.578 |
| G1L2 | HXK3 | OS06T0672400-01 | OS01T0940100-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Hexokinase-3; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (By similarity); Belongs to the hexokinase family | 0.642 |
| G1L2 | MYC2 | OS06T0672400-01 | OS10T0575000-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Os10g0575000 protein; Transcription factor MYC7E, putative, expressed; Transcriptional activator involved in jasmonate (JA) signaling pathway during spikelet development. Binds to the G2 region G-box (5'-CACGTG-3') of the MADS1 promoter and thus directly regulates the expression of MADS1. Its function in MADS1 activation is abolished by TIFY3/JAZ1 which directly target MYC2 during spikelet development | 0.618 |
| G1L2 | NAAT1 | OS06T0672400-01 | OS02T0306401-00 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Nicotianamine aminotransferase 1; Involved in biosynthesis of mugineic acid family phytosiderophores, which are ferric iron chelators produced in graminaceous plants in response to iron deficiency | 0.565 |
| G1L2 | OS07T0211500-00 | OS06T0672400-01 | OS07T0211500-00 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Os07g0211500 protein; Truncated Rc protein | 0.562 |
| G1L2 | OS08T0103000-01 | OS06T0672400-01 | OS08T0103000-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Serine/threonine protein kinase-like | 0.616 |
| G1L2 | OsJ_28883 | OS06T0672400-01 | OS09T0326100-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | CLV1 receptor kinase-like; Os09g0326100 protein; cDNA clone:J023022K03, full insert sequence | 0.769 |
| G1L2 | SRP19 | OS06T0672400-01 | OS06T0342100-01 | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | Signal recognition particle 19 kDa protein; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP | 0.755 |
| HD2 | G1L2 | OS07T0695100-01 | OS06T0672400-01 | Two-component response regulator-like PRR37; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering. Controls flowering time by negatively regulating the expression of HD3A. Acts downstream of the phytochrome B to repress the expression of EHD1, an activator of the flowering promoter genes HD3A and RFT1. Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The partic [...] | Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light | 0.578 |
| HD2 | MYC2 | OS07T0695100-01 | OS10T0575000-01 | Two-component response regulator-like PRR37; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering. Controls flowering time by negatively regulating the expression of HD3A. Acts downstream of the phytochrome B to repress the expression of EHD1, an activator of the flowering promoter genes HD3A and RFT1. Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The partic [...] | Os10g0575000 protein; Transcription factor MYC7E, putative, expressed; Transcriptional activator involved in jasmonate (JA) signaling pathway during spikelet development. Binds to the G2 region G-box (5'-CACGTG-3') of the MADS1 promoter and thus directly regulates the expression of MADS1. Its function in MADS1 activation is abolished by TIFY3/JAZ1 which directly target MYC2 during spikelet development | 0.600 |
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