STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G1L2Protein g1-like2; Probable transcription regulator that acts as a developmental regulator by promoting cell growth in response to light (277 aa)    
Predicted Functional Partners:
OsJ_28883
CLV1 receptor kinase-like; Os09g0326100 protein; cDNA clone:J023022K03, full insert sequence
      
 0.769
SRP19
Signal recognition particle 19 kDa protein; Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP
      
 0.755
HXK3
Hexokinase-3; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from mitochondrion to cytosol (By similarity); Belongs to the hexokinase family
      
 0.642
MYC2
Os10g0575000 protein; Transcription factor MYC7E, putative, expressed; Transcriptional activator involved in jasmonate (JA) signaling pathway during spikelet development. Binds to the G2 region G-box (5'-CACGTG-3') of the MADS1 promoter and thus directly regulates the expression of MADS1. Its function in MADS1 activation is abolished by TIFY3/JAZ1 which directly target MYC2 during spikelet development
      
 0.618
OS08T0103000-01
Serine/threonine protein kinase-like
      
 0.616
ATG8C
Autophagy-related protein 8C; Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton; Belongs to the ATG8 family
      
 0.613
HD2
Two-component response regulator-like PRR37; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering. Controls flowering time by negatively regulating the expression of HD3A. Acts downstream of the phytochrome B to repress the expression of EHD1, an activator of the flowering promoter genes HD3A and RFT1. Controls photoperiodic flowering response. Seems to be one of the component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The partic [...]
    
 
 0.578
ADL1
Calpain-type cysteine protease ADL1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active
      
 0.567
NAAT1
Nicotianamine aminotransferase 1; Involved in biosynthesis of mugineic acid family phytosiderophores, which are ferric iron chelators produced in graminaceous plants in response to iron deficiency
      
 0.565
OS07T0211500-00
Os07g0211500 protein; Truncated Rc protein
      
 0.562
Your Current Organism:
Oryza sativa
NCBI taxonomy Id: 4530
Other names: O. sativa, Oryza sativa L., red rice, rice
Server load: low (20%) [HD]